Insertion junction: CLIP2.037578_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037578
Chromosome:chromosome 16
Location:6954584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672049 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGATAGAGGTCGGGGCCTCGCCAGAGTGGCTCTTCTTTGCGGGTGAGG
Internal bar code:CGATAACAATCCGATGGTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGACCGTCGCTTGTTTG
Suggested primer 2:CGCTTCTTGTCCTGGAACCT