Insertion junction: CLIP2.037579_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037579
Chromosome:chromosome 8
Location:4022238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800955 (1 of 1) PF00400//PF13191 - WD domain, G-beta repeat (WD40) // AAA ATPase domain (AAA_16) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCTGAGGGAGGAGGAGGAGGAGGCAGAGGCAGTGGGGGAGGTAGAG
Internal bar code:GTACGCGTAATATGGTGCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:252
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTTACAACCCGCCCCCA
Suggested primer 2:GGGTGTGTGGGTGAGTAAGG