Insertion junction: CLIP2.037599_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037599
Chromosome:chromosome 3
Location:1554377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152150 (1 of 1) IPR007087//IPR013087//IPR015880 - Zinc finger, C2H2 // Zinc finger C2H2-type/integrase DNA-binding domain // Zinc finger, C2H2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGCGGAGGGTGCCAAGCCCGCGGCGGGTGGTCGCAGCCGTGGCCGT
Internal bar code:CTATATTTCGGGTTGACTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1732
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCCTGTTGCTCAGCTG
Suggested primer 2:TCAGAAGCACATGCAGGAGG