Insertion junction: CLIP2.037600_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037600
Chromosome:chromosome 1
Location:1493333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008000 (1 of 1) K18666 - activating signal cointegrator complex subunit 1 (ASCC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTTTGGGGCCTTTGGAGGGATTGCCACTAGCAGCAAAACTCCTTAG
Internal bar code:GACACGACCGAGCGGAGATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCTGACCCGTTGCAACT
Suggested primer 2:GAAACCCGAAACCATGTGCC