Insertion junction: CLIP2.037620_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037620
Chromosome:chromosome 6
Location:4053497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278220 ELG38 Exostosin-like glycosyltransferase 38; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAATGGAATGAACTACCCCCCTCCCCTCAGTGTGGGCTGGTATGAAG
Internal bar code:CTTGGAGCCATCGTGAGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1412
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAGGCCTCCAGTGAGCAT
Suggested primer 2:GGGTGGGGGTTAGGATAGGT