Insertion junction: CLIP2.037626_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037626
Chromosome:chromosome 14
Location:2410484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623403 CDS
lncRNA_TCONS_00105622 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCGTCGACGACAGGCTTTTCCTGGCGGACTTTCAATGCGTCGCGCTT
Internal bar code:CAACATCGGGAAAGGCGTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGCAAATCGCCAGACG
Suggested primer 2:AGTAGTTCGCTAAGCTCGCC