Insertion junction: CLIP2.037629_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037629
Chromosome:chromosome 9
Location:662682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404750 SRR2 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAGGGACAGCAAACATGACAACCCTGGCTTTGGGGCTTGCTCCCGCAG
Internal bar code:ATGAGTCTAGTTGAGCACAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:2.38095
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATTCAGGTTTGCAAGG
Suggested primer 2:GTGGCAGCATTACTAACGCG