Insertion junction: CLIP2.037635_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037635
Chromosome:chromosome 16
Location:5511137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682350 (1 of 1) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCATGTTCTCGCTCTCCGCGCTGTTCTTGGTGAGCCACGTCTTCACCG
Internal bar code:GGCGGGCGGCGCAGCAGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2878
LEAP-Seq percent confirming:89.1892
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGGTGAGTTAATGGTGA
Suggested primer 2:TCCCATCACATTCAGCGCTT