Insertion junction: CLIP2.037641_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037641
Chromosome:chromosome 14
Location:639042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612100 RWP3 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCCAATGGTTTTGGGCACCCAACCGGGTAGCAACGCTCGCACGCCCG
Internal bar code:GCATCGCATTGTACAGTAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1692
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGATCGCACTCCAATGT
Suggested primer 2:TTGAGCAGCCAGTCTGTCTG