Insertion junction: CLIP2.037641_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037641
Chromosome:chromosome 14
Location:639169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612100 RWP3 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTACACGCGAGCGGCAAAAGGTTACCAGACAACAAAACCCCCAACCCC
Internal bar code:GCATCGCATTGTACAGTAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5559
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:133
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCAGCCAGTCTGTCTG
Suggested primer 2:ACACGATCGCACTCCAATGT