Insertion junction: CLIP2.037649_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037649
Chromosome:chromosome 10
Location:5190888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455750 SRH19 (1 of 3) K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATAGAGCACGTTTTGTGAGGGGTGGAATTGCGGATGGGCTGAGGTGT
Internal bar code:CCTAGACATATTCATCGGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4037
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGTGATGAGTGCACAT
Suggested primer 2:ATACCGTATTGCCGCCTAGC