Insertion junction: CLIP2.037657_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037657
Chromosome:chromosome 16
Location:413047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGGATCTCAGCATGGCGACGGGCTACGTGATTCCCTCGAACAAGGT
Internal bar code:CAGGCCATGATCATCCTGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:67.6471
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGAGAGTGTTGGGTG
Suggested primer 2:ATCGCTAGAGTGCTCGTTCG