Insertion junction: CLIP2.037658_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037658
Chromosome:chromosome 10
Location:5690401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGGGGGATAAGGTCAGGGGGCCCAGGTGGGTGTCGGAACGGGTGGC
Internal bar code:GGGTTCGCTATAGGGTGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCAGGCTGTATCGGAT
Suggested primer 2:GTACGCCAGCACCTATCAGG