Insertion junction: CLIP2.037671_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037671
Chromosome:chromosome 6
Location:1899060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264150 MAW11 Membrane-associated hydroxyproline-rich glycoprotein 11; (1 of 1) 2.1.1.53 - Putrescine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCAAGTGCGCAGCAGCAGACACAGCAGGCAGACACAGTAGGCAGAG
Internal bar code:TGTTACTGGTGTCTTGGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1626
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTACACACACGCAGCGT
Suggested primer 2:TCCGGCTCAAACACCTCAAC