Insertion junction: CLIP2.037685_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037685
Chromosome:chromosome 16
Location:6173879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGAGGATGGCGACGTGCTGCCTGGGTGAAGCGTGTTGGGCCTGTT
Internal bar code:CTTTTTGGGCCTCTCAAGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2253
LEAP-Seq percent confirming:53.6232
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTCCTTTTGGTTTGGT
Suggested primer 2:ATACACACACAGGGCCTTCG