Insertion junction: CLIP2.037699_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037699
Chromosome:chromosome 16
Location:178349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695050 ECH3,HCD1 (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase; Enoyl-CoA hydratase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGTGGCATGCGCGCCCAGTTCTAATCACTTCCACAAGCCCACACGT
Internal bar code:AGTTGAGGTAAGGGTCCATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1419
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAAGACGGGGATCACAG
Suggested primer 2:GGTCGACCCGTAAACTTGGT