Insertion junction: CLIP2.037706_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037706
Chromosome:chromosome 13
Location:2222051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578012 (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED 3'UTR
Cre13.g578074 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACACGTTCCGCCAGGGCTCAATCCCGAGTGGCCCTGCCCCGGCGGC
Internal bar code:GGCGCAGTTAGGCGCTCCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGTGCATGTGCCCTGC
Suggested primer 2:GCATGAGGAGAGACGACTCG