Insertion junction: CLIP2.037718_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037718
Chromosome:chromosome 13
Location:1477585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572350 HSP22G Heat shock protein 22G; (1 of 1) PTHR11527//PTHR11527:SF110 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // 17.4 KDA CLASS I HEAT SHOCK PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCTGGGCTCCCAGGAGCGTGCATAGCCAACAAGAACAACACGGCCA
Internal bar code:GTCACGGTTGGATTGCATGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2544
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACTAACGTTGGCGCAA
Suggested primer 2:ACACCATCAGTACATGCGCA