Insertion junction: CLIP2.037719_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037719
Chromosome:chromosome 10
Location:886344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423800 KU80 (1 of 1) K10885 - ATP-dependent DNA helicase 2 subunit 2 (XRCC5, KU80, G22P2); ATP-dependent DNA helicase 2 subunit KU80 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTCGCGTTGCCCAACCTTCCGCCTCCCTCCCCCTTCGTAAAGCTCGG
Internal bar code:TTCTGTTCTTTGTTTGAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:39.2857
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCTGATTCGGAGGTCGG
Suggested primer 2:GCTGGGTGTGGATGACATGA