Insertion junction: CLIP2.037720_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037720
Chromosome:chromosome 6
Location:1236540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258583 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGCACGACGATATCTGGCTTTGTCTGCGTGCGGCACAACGGGTGAA
Internal bar code:AAGTACCGTACCCTCTGCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1592
LEAP-Seq percent confirming:53.5714
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAAGCAGAGGGCCAGAA
Suggested primer 2:TTCTTGGGGCTTGTCGACTC