Insertion junction: CLIP2.037722_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037722
Chromosome:chromosome 4
Location:1201829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215400 AKC3 conserved expressed protein related to ABC1/COQ8 mitochondrial putative ser/thr kinase; (1 of 2) PTHR10566//PTHR10566:SF86 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // ABC1 PROTEIN KINASE 6 5'UTR_intron
Cre04.g800458 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCGTTCGATCCCCACCTCCACAGAATGTGCCAATCTTGCGCACATT
Internal bar code:TCTAATATTTCTATTTGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTTTCCCATCCTCCTA
Suggested primer 2:TTCCTCTTACCGGCCTGAGA