Insertion junction: CLIP2.037733_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037733
Chromosome:chromosome 5
Location:3171089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232000 (1 of 1) IPR001623//IPR011989 - DnaJ domain // Armadillo-like helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATAGTCAAGGAATTGTCGGCCATAAATCCAGTCCAATCACGTGTAA
Internal bar code:ATAGAATAAGTGCAGGATCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAGGAACACATGCATG
Suggested primer 2:AAACCTCTTCACGTCGGTCC