Insertion junction: CLIP2.037735_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037735
Chromosome:chromosome 10
Location:1760205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN 3'UTR
Cre10.g801118 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGCCGCAGCATCATCTCTAGCTCGTGACGCACAGTGATGGGCAACCA
Internal bar code:GCTCTTTGTCGAAACCCTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1670
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGCACGTGTTGTTTCTT
Suggested primer 2:GTTGTGGAAGACGAGAGGGG