Insertion junction: CLIP2.037737_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037737
Chromosome:chromosome 12
Location:8721344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547651 CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATATTATGTGCCCAAGGTTGTGAATGTAAGTGGGAACATCACGTGG
Internal bar code:TACAGATATTATTTACGGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2058
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAACCCACGTGAACCG
Suggested primer 2:GCCGTGTACACTCACCTCAA