Insertion junction: CLIP2.037742_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037742
Chromosome:chromosome 2
Location:5181020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112000 AOT7 Amino acid transporter; (1 of 1) K14997 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11 (SLC38A11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATCTCGGGCGCGTGGGGGTCATCCTCAAGAAGCAGAACGGAGGGAT
Internal bar code:TGAAGGCGGTGGTGCGTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1498
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGTTTGGTGTGTACAC
Suggested primer 2:AGCAGCAAGATGAGGGACAC