Insertion junction: CLIP2.037747_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037747
Chromosome:chromosome 1
Location:4588099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031650 CGLD12 Conserved in the Green Lineage and Diatoms; (1 of 2) PF05637 - galactosyl transferase GMA12/MNN10 family (Glyco_transf_34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACATCCTGATCACCAACACATCAATGCCACTGGAGCGCCTGCTGCC
Internal bar code:AACACTTATGAGAGCTGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1837
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCACTCACGGGTCCATGG
Suggested primer 2:CTGACTGCTCAGGATTGGCA