Insertion junction: CLIP2.037747_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037747
Chromosome:chromosome 1
Location:4588100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031650 CGLD12 Conserved in the Green Lineage and Diatoms; (1 of 2) PF05637 - galactosyl transferase GMA12/MNN10 family (Glyco_transf_34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCACCCACATTACCCAGTCGTAGGCGTCCAGCGCAGACAGCACAGCC
Internal bar code:AACACTTATGAGAGCTGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4576
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACTGCTCAGGATTGGCA
Suggested primer 2:TTTCACTCACGGGTCCATGG