Insertion junction: CLIP2.037748_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037748
Chromosome:chromosome 6
Location:8736534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310650 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAAGGTACGGTACCCATGCGTACCCCCCCCCGGTGGTCCAGTTTGTCC
Internal bar code:AGGAGAACATAGCACTACTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCCTCACTTGCCGTAC
Suggested primer 2:ATGCATCCCCATCCCAACTG