Insertion junction: CLIP2.037754_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037754
Chromosome:chromosome 11
Location:2095867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTACCTCGATGTAGTCCTCTGCGTCCGGGTAGGCGCTGGGCGCCGT
Internal bar code:CTCCGAGGTGTGTAAAGAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATCTGCCCCAACGACTT
Suggested primer 2:ATTCACTCCGTCATTGCCGT