Insertion junction: CLIP2.037754_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037754
Chromosome:chromosome 11
Location:2095868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGTTCATGGTTACTTAAGAAGTTAAGGGGGTTATAGATACCCCAAAC
Internal bar code:CTCCGAGGTGTGTAAAGAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1832
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCACTCCGTCATTGCCGT
Suggested primer 2:CTGATCTGCCCCAACGACTT