Insertion junction: CLIP2.037759_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037759
Chromosome:chromosome 9
Location:1429356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399907 (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCCTTCTAGCGCCTTGCCACCTTCCAACCCCCCCCACACACACACAC
Internal bar code:GTCCGATGTGGTGAACGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAAGAGGTAGCTCGCCCG
Suggested primer 2:CAAACACACACACACGGTCC