Insertion junction: CLIP2.037760_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037760
Chromosome:chromosome 8
Location:859252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361350 (1 of 3) PF01936 - NYN domain (NYN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGCGAGCCCCCTGACCTGTTGGTCATAGTGACTGCTGCTGCTGCT
Internal bar code:TTGGAAAAACGTTTTCGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1020
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTATCCAACCACCCAACC
Suggested primer 2:GTACGCACGGCTCTCTCTAC