Insertion junction: CLIP2.037765_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037765
Chromosome:chromosome 3
Location:616128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145487 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTACAAGCTGCATGAGCTGCAGGCGCAGCTGGCGGAGGCGCAGCGG
Internal bar code:AGGGTGGTGCGGAAGGGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2281
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCTCCTCCTCCTGCTC
Suggested primer 2:ACACAGTTATGGCACTCGCA