Insertion junction: CLIP2.037778_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037778
Chromosome:chromosome 17
Location:84792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696500 PHC19 Pherophorin-chlamydomonas homolog 19; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTTCACCCTGGCTAGCGCCCCCGTGCTGTCCCGCTCGCCCACCGGC
Internal bar code:ATCAGATCTGGGTTCATGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3501
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCCTATATCTGCAGCGG
Suggested primer 2:CACGACAAGGCGCTTTTCAA