Insertion junction: CLIP2.037783_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037783
Chromosome:chromosome 9
Location:2676504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801021 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTCGGGGCTGTGGCACGCCAAACAGACCGTGACAGGGACAGTGACAG
Internal bar code:GCGGGGCGAATAACAGAGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1445
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCCATCACACTCCCAC
Suggested primer 2:CCGGGTCGGTATCTCACATG