Insertion junction: CLIP2.037787_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037787
Chromosome:chromosome 11
Location:3520833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477700 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGCGCCTCAGGCACCTCGCCCTCGGGTCTGTCTGCGCCTGCGCACA
Internal bar code:GCGACTAGTCCCGATGAACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:197
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCGCTGATGAGCCTTTT
Suggested primer 2:GTAGTTGCGGCAAGTCCTCT