Insertion junction: CLIP2.037795_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037795
Chromosome:chromosome 17
Location:2739755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717700 (1 of 1) PTHR31833:SF2 - UPF0690 PROTEIN C1ORF52 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGGAGGCTGTGGGCTGCGGCGCTGTGAAGATGGTGATGGCGATGGC
Internal bar code:TAGGTGTAACACACTGTCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2730
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAGTAGACGCCAAACT
Suggested primer 2:CTCCATGACAACCTGGGGTC