Insertion junction: CLIP2.037800_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037800
Chromosome:chromosome 2
Location:5348312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113400 PACRG1,PACRG,BUG21 Parkin Co-Regulated Gene Protein; (1 of 1) PTHR21207:SF2 - PARKIN COREGULATED GENE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTGGGGTTGGGCCTGCCAGCGGGGTACCTGTGCACCATCGCCGGAGT
Internal bar code:TTAGTTTGACAGGACCATCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGCGCTTGTACTGTGC
Suggested primer 2:GAATCTGGCGGTAGTAGGGC