Insertion junction: CLIP2.037804_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037804
Chromosome:chromosome 11
Location:625939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGTCGTAAATGCCAGCCTTAAGTCAAGAGAGAGAGGGAGAGAGGGG
Internal bar code:AGGTGATATACCCTCCCAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGACAGGACGCAACGTAACA
Suggested primer 2:TCGCTGTTGTCAACGTAGCT