Insertion junction: CLIP2.037806_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037806
Chromosome:chromosome 2
Location:1881232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087551 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGCGGCAGCTGCAACGGCAACGACGGCGGCGGCTGCCGCCGCCACG
Internal bar code:TACGTCGAGCGATGGGTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3807
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCGCAGCATCCCTAGAG
Suggested primer 2:GAGGTCGCCTACATCTTCGG