Insertion junction: CLIP2.037808_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037808
Chromosome:chromosome 11
Location:1998372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467768 (1 of 1) K10277 - lysine-specific demethylase 8 [EC:1.14.11.27] (KDM8, JMJD5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGTTTTGGTGCTTTGCTAAGGACGGACGGAGCTGGGGGGCTTGGGG
Internal bar code:AAACATGTTTGCCGCGGGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCAGTCACGTCCTTGA
Suggested primer 2:GCCACACTTTCATGCAAGCA