Insertion junction: CLIP2.037815_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037815
Chromosome:chromosome 8
Location:48964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358200 ACV4 protein kinase; (1 of 6) PTHR23257//PTHR23257:SF529 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCCTGGCCCTGCAGCAGCGGCTGTGCGTCGTGGCCGGCGCCGTCGCC
Internal bar code:GAAGGCACCGTGGTTGCTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCACTGCGATCCTGAATC
Suggested primer 2:GCAGGGCCTTACAACCTCAT