Insertion junction: CLIP2.037816_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037816
Chromosome:chromosome 7
Location:3421365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTCGGGTAGCAGGCGCTTCCCCTGCGCCGCGGCGGTTGCCTCCTCCG
Internal bar code:TCGGCCGGCTTAATAGGGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2639
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGCTCTCTCACCTTATC
Suggested primer 2:GGACCAAACAGCCCAGCTAT