Insertion junction: CLIP2.037839_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037839
Chromosome:chromosome 16
Location:8002117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692116 (1 of 3) PTHR23505:SF12 - MAJOR FACILITATOR PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGCTGGCCAACAGCGCCTTTCGCGCGCAAGTCCAAAACCTCATGTAC
Internal bar code:AAGATCACGCATAATCGAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:914
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCTCCTTGCTCGGAAT
Suggested primer 2:CCATCTGCAACCCCAAAAGC