Insertion junction: CLIP2.037840_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037840
Chromosome:chromosome 11
Location:605828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCTACTGGTGAGGGGGGGGAGAAAGAGGGGGCGTGGCGTGTGTGTA
Internal bar code:TGGATGAATTGGTGTATCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:211
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAACTCGAACTCCAGCT
Suggested primer 2:CACCACCATCTCCACAGGTC