Insertion junction: CLIP2.037845_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037845
Chromosome:chromosome 2
Location:5081379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111300 (1 of 5) PF13391 - HNH endonuclease (HNH_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATGTAAATGTACTATGTTCATATTATATGAATGGCAAGTTATGGCCG
Internal bar code:CAGTCAGAAGTCCACCTCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3782
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGTTTGGGCTCCACACA
Suggested primer 2:CACCGAGAGATGTCATCCGG