Insertion junction: CLIP2.037852_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037852
Chromosome:chromosome 6
Location:8315185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307250 (1 of 1) PTHR18937//PTHR18937:SF240 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATAACTGCATGTTTTGATTTGCGTTCAACAGCAAGCACTTCCATATGA
Internal bar code:CGTGCCCGATATGGTCTTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3466
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAGGTTGGGCATGCGTA
Suggested primer 2:GCATGCGGCTCTTCTCAAAG