Insertion junction: CLIP2.037875_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037875
Chromosome:chromosome 13
Location:4776988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604550 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCTCCGCAGCCGCCTCAGCTGCCAGCGCCCGCACCGCGCTCACG
Internal bar code:AGTACAGCGATGGGGCAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:489
LEAP-Seq percent confirming:47.1698
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGACTACAGGTAGGGGT
Suggested primer 2:AGAAGCTTGTGCACGTACGA