Insertion junction: CLIP2.037877_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037877
Chromosome:chromosome 1
Location:497089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g002950 (1 of 1) PF06677 - Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) (Auto_anti-p27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGAAACGTTGAGGCACAGGCGAAGGATAGCACAGGTCAGTGTCAGCG
Internal bar code:CCGTTGACTTTCCATCCACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3923
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACACAGGAAGGCCATAC
Suggested primer 2:GTGTGTGAACGCAGGTGTTC