Insertion junction: CLIP2.037878_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037878
Chromosome:chromosome 13
Location:4867920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605100 PDE20 (1 of 1) PF00233//PF01590 - 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) // GAF domain (GAF); 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGACCTTCGCCATCCTCAGCCGCACCGACTGCGCCGTGCTGGCCGG
Internal bar code:CCGACATTCGTGTAGCGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGCTTCTGGAACTCCT
Suggested primer 2:GTGTGGAGGCTCAGCTTCTT